Sequence Similarity Clusters for the Entities in PDB 1NGY

Entity #1 | Chains: A
Mature Metal Chelatase Catalytic Antibody, Light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 7933
95 % 4 6 8004 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 334 762 2
70 % 1094 2519 1
50 % 2235 5107 1
40 % 2563 5756 1
30 % 3113 7175 1
Entity #2 | Chains: B
Mature Metal Chelatase Catalytic Antibody, Heavy chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50938
95 % 4 6 7954 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 3.3
PDBFlex
90 % 6 8 6773
70 % 1083 2478 2
50 % 2236 5107 1
40 % 2564 5756 1
30 % 3114 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures