Sequence Similarity Clusters for the Entities in PDB 1NGW

Entity #1 | Chains: A,L
Mature Metal Chelatase Catalytic Antibody, Light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21163
95 % 6 6 7755 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 2.5
PDBFlex
90 % 560 701 3
70 % 1798 2287 1
50 % 3650 4633 1
40 % 3650 4633 1
30 % 4316 5461 1
Entity #2 | Chains: B,H
Mature Metal Chelatase Catalytic Antibody, Heavy chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21046
95 % 6 6 7734 Flexibility: Medium
Max RMSD: 5.7, Avg RMSD: 3.0
PDBFlex
90 % 6 6 7690
70 % 1764 2244 2
50 % 3651 4633 1
40 % 3651 4633 1
30 % 4317 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.