Sequence Similarity Clusters for the Entities in PDB 1NGW

Entity #1 | Chains: A,L
Mature Metal Chelatase Catalytic Antibody, Light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22194
95 % 6 6 8110 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 633 788 2
70 % 1943 2474 1
50 % 3944 5011 1
40 % 3944 5011 1
30 % 4707 5941 1
Entity #2 | Chains: B,H
Mature Metal Chelatase Catalytic Antibody, Heavy chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22060
95 % 6 6 8087 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 3.3
PDBFlex
90 % 6 6 8027
70 % 1902 2424 2
50 % 3945 5011 1
40 % 3945 5011 1
30 % 4708 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures