Sequence Similarity Clusters for the Entities in PDB 1NGW

Entity #1 | Chains: A,L
Mature Metal Chelatase Catalytic Antibody, Light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21403
95 % 6 6 7849 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 579 724 3
70 % 1842 2346 1
50 % 3739 4752 1
40 % 3739 4752 1
30 % 4429 5606 1
Entity #2 | Chains: B,H
Mature Metal Chelatase Catalytic Antibody, Heavy chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21282
95 % 6 6 7829 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 3.3
PDBFlex
90 % 6 6 7779
70 % 1804 2299 2
50 % 3740 4752 1
40 % 3740 4752 1
30 % 4430 5606 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.