Sequence Similarity Clusters for the Entities in PDB 1NGW

Entity #1 | Chains: A,L
Mature Metal Chelatase Catalytic Antibody, Light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21869
95 % 6 6 7991 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 609 763 2
70 % 1906 2426 1
50 % 3868 4913 1
40 % 3868 4913 1
30 % 4569 5780 1
Entity #2 | Chains: B,H
Mature Metal Chelatase Catalytic Antibody, Heavy chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21742
95 % 6 6 7970 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 3.3
PDBFlex
90 % 6 6 7913
70 % 1865 2376 2
50 % 3869 4913 1
40 % 3869 4913 1
30 % 4570 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures