Sequence Similarity Clusters for the Entities in PDB 1NGQ

Entity #1 | Chains: L
N1G9 (IGG1-LAMBDA) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 7079
95 % 14 39 510 Flexibility: Low
Max RMSD: 8.9, Avg RMSD: 2.4
PDBFlex
90 % 17 45 469
70 % 1072 2553 1
50 % 2197 5180 1
40 % 2524 5834 1
30 % 3073 7269 1
Entity #2 | Chains: H
N1G9 (IGG1-LAMBDA) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46236
95 % 1 8 10235 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.2
PDBFlex
90 % 11 37 937
70 % 1063 2511 2
50 % 2198 5180 1
40 % 2525 5834 1
30 % 3074 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1NGQ 2 H N1G9 (IGG1-LAMBDA) FAB FRAGMENT 10090
2 1NGP 2 H N1G9 (IGG1-LAMBDA) FAB FRAGMENT 10090