Sequence Similarity Clusters for the Entities in PDB 1NGQ

Entity #1 | Chains: L
N1G9 (IGG1-LAMBDA) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 7726
95 % 14 39 539 Flexibility: Low
Max RMSD: 8.9, Avg RMSD: 2.4
PDBFlex
90 % 17 45 488
70 % 1105 2621 1
50 % 2268 5323 1
40 % 2602 6003 1
30 % 3159 7460 1
Entity #2 | Chains: H
N1G9 (IGG1-LAMBDA) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47130
95 % 1 8 10464 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.2
PDBFlex
90 % 11 39 768
70 % 1097 2580 2
50 % 2269 5323 1
40 % 2603 6003 1
30 % 3160 7460 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1NGQ 2 H N1G9 (IGG1-LAMBDA) FAB FRAGMENT 10090
2 1NGP 2 H N1G9 (IGG1-LAMBDA) FAB FRAGMENT 10090