Sequence Similarity Clusters for the Entities in PDB 1NGQ

Entity #1 | Chains: L
N1G9 (IGG1-LAMBDA) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 12812
95 % 14 39 445 Flexibility: Low
Max RMSD: 8.9, Avg RMSD: 2.4
PDBFlex
90 % 17 45 389
70 % 949 2287 1
50 % 1943 4633 1
40 % 1943 4633 1
30 % 2193 5461 1
Entity #2 | Chains: H
N1G9 (IGG1-LAMBDA) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39796
95 % 1 8 9191 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 2.2
PDBFlex
90 % 6 29 861
70 % 941 2244 2
50 % 1944 4633 1
40 % 1944 4633 1
30 % 2194 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.