Sequence Similarity Clusters for the Entities in PDB 1NGP

Entity #1 | Chains: L
N1G9 (IGG1-LAMBDA) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 12454
95 % 15 39 426 Flexibility: Low
Max RMSD: 8.9, Avg RMSD: 2.3
PDBFlex
90 % 18 45 381
70 % 167 394 10
50 % 1946 4501 1
40 % 1946 4501 1
30 % 2189 5303 1
Entity #2 | Chains: H
N1G9 (IGG1-LAMBDA) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38707
95 % 2 8 8942 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.2
PDBFlex
90 % 7 25 1111
70 % 942 2178 1
50 % 1947 4501 1
40 % 1947 4501 1
30 % 2190 5303 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.