Sequence Similarity Clusters for the Entities in PDB 1NGN

Entity #1 | Chains: A
methyl-CpG binding protein MBD4 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43726
95 % 5 12 5970 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 5 12 5969
70 % 5 12 5823
50 % 5 12 5473
40 % 5 12 5139
30 % 5 12 4626

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.