Sequence Similarity Clusters for the Entities in PDB 1NGK

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Hemoglobin-like protein HbO protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5262
95 % 2 2 2535 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 2 2586
70 % 2 2 2577
50 % 3 4 2189
40 % 6 10 1491
30 % 6 10 1466

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.