Sequence Similarity Clusters for the Entities in PDB 1NFY

Entity #1 | Chains: A
Coagulation factor XA, heavy chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 119 208
95 % 68 134 247 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 68 134 261
70 % 68 135 288
50 % 553 677 14
40 % 1210 1682 4
30 % 1303 1831 6
Entity #2 | Chains: B
Coagulation factor XA, light chain protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 39 988
95 % 28 40 1322 Flexibility: No
Max RMSD: 3.8, Avg RMSD: 0.4
PDBFlex
90 % 28 40 1347
70 % 28 40 1364
50 % 38 74 739
40 % 38 74 770
30 % 38 74 764

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.