Sequence Similarity Clusters for the Entities in PDB 1NFU

Entity #1 | Chains: A
COAGULATION FACTOR XA, HEAVY CHAIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 62 119 207
95 % 74 134 242 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 74 134 255
70 % 74 135 283
50 % 562 677 13
40 % 1240 1669 4
30 % 1336 1811 6
Entity #2 | Chains: B
COAGULATION FACTOR XA, LIGHT CHAIN protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59684
95 % 1 1 41615
90 % 1 1 39588
70 % 1 1 34929
50 % 1 1 29813
40 % 1 1 26310
30 % 1 1 22298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.