Sequence Similarity Clusters for the Entities in PDB 1NFU

Entity #1 | Chains: A
COAGULATION FACTOR XA, HEAVY CHAIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 62 119 214
95 % 74 134 256 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 74 134 270
70 % 74 135 301
50 % 569 683 14
40 % 1260 1698 4
30 % 1356 1848 6
Entity #2 | Chains: B
COAGULATION FACTOR XA, LIGHT CHAIN protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62073
95 % 1 1 43316
90 % 1 1 41137
70 % 1 1 36195
50 % 1 1 30839
40 % 1 1 27199
30 % 1 1 23067

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.