Sequence Similarity Clusters for the Entities in PDB 1NFU

Entity #1 | Chains: A
COAGULATION FACTOR XA, HEAVY CHAIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 62 119 211
95 % 74 134 250 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 74 134 265
70 % 74 135 292
50 % 563 678 14
40 % 1254 1685 4
30 % 1350 1834 6
Entity #2 | Chains: B
COAGULATION FACTOR XA, LIGHT CHAIN protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61356
95 % 1 1 42816
90 % 1 1 40690
70 % 1 1 35837
50 % 1 1 30531
40 % 1 1 26931
30 % 1 1 22838

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.