Sequence Similarity Clusters for the Entities in PDB 1NFO

Entity #1 | Chains: A
APOLIPOPROTEIN E2 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16300
95 % 4 6 12045 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 6 11869
70 % 4 7 10435
50 % 4 7 9404
40 % 4 7 8520
30 % 4 7 7364

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures