Sequence Similarity Clusters for the Entities in PDB 1NFN

Entity #1 | Chains: A
APOLIPOPROTEIN E3 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42680
95 % 1 6 12773 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 6 12568
70 % 1 7 10026
50 % 1 7 9093
40 % 1 7 8319
30 % 1 7 7327

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures