Sequence Similarity Clusters for the Entities in PDB 1NFD

Entity #1 | Chains: A,C
N15 ALPHA-BETA T-CELL RECEPTOR protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39750
95 % 1 1 30192
90 % 1 1 28921
70 % 4 5 6522
50 % 224 285 82
40 % 224 285 101
30 % 4083 5225 1
Entity #2 | Chains: B,D
N15 ALPHA-BETA T-CELL RECEPTOR protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12101
95 % 2 2 11696
90 % 2 2 11529
70 % 235 295 45
50 % 235 298 76
40 % 235 298 93
30 % 4084 5225 1
Entity #3 | Chains: E,G
H57 FAB protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39269
95 % 1 1 29895
90 % 1 1 28663
70 % 1 1 25750
50 % 3466 4435 1
40 % 3466 4435 1
30 % 4085 5225 1
Entity #4 | Chains: F,H
H57 FAB protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38302
95 % 1 1 29356
90 % 1 1 28279
70 % 1674 2145 1
50 % 3467 4435 1
40 % 3467 4435 1
30 % 4086 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.