Sequence Similarity Clusters for the Entities in PDB 1NFD

Entity #1 | Chains: A,C
N15 ALPHA-BETA T-CELL RECEPTOR protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41005
95 % 1 1 31149
90 % 1 1 29805
70 % 4 5 6778
50 % 228 289 83
40 % 228 289 102
30 % 4204 5440 1
Entity #2 | Chains: B,D
N15 ALPHA-BETA T-CELL RECEPTOR protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12503
95 % 2 2 12085
90 % 2 2 11924
70 % 239 299 43
50 % 239 302 76
40 % 239 302 94
30 % 4205 5440 1
Entity #3 | Chains: E,G
H57 FAB protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40520
95 % 1 1 30852
90 % 1 1 29550
70 % 1 1 26474
50 % 3563 4619 1
40 % 3563 4619 1
30 % 4206 5440 1
Entity #4 | Chains: F,H
H57 FAB protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39527
95 % 1 1 30292
90 % 1 1 29159
70 % 1723 2238 2
50 % 3564 4619 1
40 % 3564 4619 1
30 % 4207 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.