Sequence Similarity Clusters for the Entities in PDB 1NFD

Entity #1 | Chains: A,C
N15 ALPHA-BETA T-CELL RECEPTOR protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38924
95 % 1 1 29580
90 % 1 1 28353
70 % 4 5 6350
50 % 220 280 81
40 % 220 280 98
30 % 3947 5038 1
Entity #2 | Chains: B,D
N15 ALPHA-BETA T-CELL RECEPTOR protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 11801
95 % 2 2 11404
90 % 2 2 11250
70 % 231 290 42
50 % 231 293 75
40 % 231 293 90
30 % 3948 5038 1
Entity #3 | Chains: E,G
H57 FAB protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38444
95 % 1 1 29283
90 % 1 1 28093
70 % 1 1 25264
50 % 3350 4272 1
40 % 3350 4272 1
30 % 3949 5038 1
Entity #4 | Chains: F,H
H57 FAB protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37499
95 % 1 1 28753
90 % 1 1 27711
70 % 1618 2066 1
50 % 3351 4272 1
40 % 3351 4272 1
30 % 3950 5038 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.