Sequence Similarity Clusters for the Entities in PDB 1NF5

Entity #1 | Chains: A,C
Alpha-lactalbumin protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 12 2301
95 % 3 12 2590 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 3 12 2656
70 % 3 12 2638
50 % 11 28 961
40 % 788 1016 10
30 % 788 1016 18
Entity #2 | Chains: B,D
beta-1,4-galactosyltransferase protein, length: 286 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1660
95 % 4 20 1426 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 9 37 601
70 % 9 37 644
50 % 9 37 689
40 % 11 41 675
30 % 11 41 677

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2FY7 1 A Beta-1,4-galactosyltransferase 1 catalytic domain, residues 125-397 9606
2 3LW6 1 A Beta-4-galactosyltransferase 7 Catalytic domain 7227 2.4.1 | Details 2.4.1.133 | Details
3 2FYA 1 A Beta-1,4-galactosyltransferase 1 catalytic domain, residues 125-397 9606
4 2FYB 1 A Beta-1,4-galactosyltransferase 1 catalytic domain, residues 125-397 9606
5 1YRO 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
6 1PZT 1 A Beta-1,4-galactosyltransferase 1 CATALYTIC DOMAIN, RESIDUES 130-402 9913
7 2AGD 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
8 4LW3 1 A Beta-4-galactosyltransferase 7 catalytic domain, UNP residues 71-311 7227 2.4.1 | Details 2.4.1.133 | Details
9 4EE4 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain 9606
10 1NMM 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX Catalytic Domain, residues 130-402 9913
11 1NF5 2 B, D beta-1,4-galactosyltransferase 9913
12 1NKH 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
13 2FYC 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913 2.4.1 | Details
14 2FYD 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913 2.4.1 | Details
15 2AH9 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
16 4EEA 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
17 2AES 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
18 2AEC 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
19 1NQI 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
20 1OQM 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913
21 2AE7 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
22 4M4K 1 A Beta-4-galactosyltransferase 7 catalytic domain, UNP residues 71-311 7227 2.4.1 | Details 2.4.1.133 | Details
23 4EEM 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain 9606
24 4EEG 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
25 4EE5 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
26 3EE5 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain of Beta-1,4-Galactosyltransferase 9606
27 4EE3 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain 9606
28 1TVY 1 A, B Beta-1,4-galactosyltransferase 1 catalytic domain 9913
29 1TW5 1 A, B Beta-1,4-galactosyltransferase 1 catalytic domain 9913
30 1TW1 1 A, B Beta-1,4-galactosyltransferase 1 catalytic domain 9913
31 4LW6 1 A Beta-4-galactosyltransferase 7 catalytic domain, UNP residues 71-311 7227 2.4.1 | Details 2.4.1.133 | Details
32 1O0R 1 A, B beta-1,4-galactosyltransferase 9913
33 1O23 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE RESIDUES 57-329 9913
34 4EEO 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
35 1PZY 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS C AND D FORM FIRST, B AND D SECOND LACTOSE SYNTHASE COMPLEX Catalytic Domain, residues 130-402 9913
36 4KRV 1 A, B Beta-1,4-galactosyltransferase 1 Catalytic Domain, UNP residues 130-402 9913
37 1NWG 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913
38 1NHE 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
39 1FGX 1 A, B BETA 1,4 GALACTOSYLTRANSFERASE CATALYTIC DOMAIN 9913
40 4L41 2 C Beta-1,4-galactosyltransferase 1 UNP residues 126-398 9606
41 1FR8 1 A, B BETA 1,4 GALACTOSYLTRANSFERASE CATALYTIC DOMAIN 9913