Sequence Similarity Clusters for the Entities in PDB 1NF5

Entity #1 | Chains: A,C
Alpha-lactalbumin protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 12 2530
95 % 3 12 2810 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 3 12 2873
70 % 3 12 2845
50 % 12 29 984
40 % 815 1049 10
30 % 815 1049 19
Entity #2 | Chains: B,D
beta-1,4-galactosyltransferase protein, length: 286 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1737
95 % 4 20 1506 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 10 39 590
70 % 10 39 637
50 % 10 39 682
40 % 12 43 683
30 % 12 43 684

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2FY7 1 A Beta-1,4-galactosyltransferase 1 catalytic domain, residues 125-397 9606
2 6FWT 1 A Beta-1,4-galactosyltransferase 1 9606
3 3LW6 1 A Beta-4-galactosyltransferase 7 Catalytic domain 7227 2.4.1 | Details 2.4.1.133 | Details
4 2FYA 1 A Beta-1,4-galactosyltransferase 1 catalytic domain, residues 125-397 9606
5 2FYB 1 A Beta-1,4-galactosyltransferase 1 catalytic domain, residues 125-397 9606
6 1YRO 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
7 1PZT 1 A Beta-1,4-galactosyltransferase 1 CATALYTIC DOMAIN, RESIDUES 130-402 9913
8 2AGD 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
9 4LW3 1 A Beta-4-galactosyltransferase 7 catalytic domain, UNP residues 71-311 7227 2.4.1 | Details 2.4.1.133 | Details
10 4EE4 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain 9606
11 1NMM 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX Catalytic Domain, residues 130-402 9913
12 1NF5 2 B, D beta-1,4-galactosyltransferase 9913
13 1NKH 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
14 2FYC 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913 2.4.1 | Details
15 2FYD 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913 2.4.1 | Details
16 2AH9 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
17 4EEA 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
18 2AES 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
19 2AEC 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
20 1NQI 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
21 1OQM 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913
22 2AE7 1 A, B, C Beta-1,4-galactosyltransferase 1 N-acetyllactosamine synthase part Catalytic domain, Residues 126-398 9606
23 4M4K 1 A Beta-4-galactosyltransferase 7 catalytic domain, UNP residues 71-311 7227 2.4.1 | Details 2.4.1.133 | Details
24 4EEM 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain 9606
25 4EEG 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
26 4EE5 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
27 3EE5 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain of Beta-1,4-Galactosyltransferase 9606
28 4EE3 1 A, B, C Beta-1,4-galactosyltransferase 1 Catalytic domain 9606
29 1TVY 1 A, B Beta-1,4-galactosyltransferase 1 catalytic domain 9913
30 1TW5 1 A, B Beta-1,4-galactosyltransferase 1 catalytic domain 9913
31 1TW1 1 A, B Beta-1,4-galactosyltransferase 1 catalytic domain 9913
32 4LW6 1 A Beta-4-galactosyltransferase 7 catalytic domain, UNP residues 71-311 7227 2.4.1 | Details 2.4.1.133 | Details
33 1O0R 1 A, B beta-1,4-galactosyltransferase 9913
34 1O23 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE RESIDUES 57-329 9913
35 4EEO 1 A, B, C Beta-1,4-galactosyltransferase 1 catalytic domain 9606
36 1PZY 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS C AND D FORM FIRST, B AND D SECOND LACTOSE SYNTHASE COMPLEX Catalytic Domain, residues 130-402 9913
37 6FWU 1 A, B Beta-1,4-galactosyltransferase 1 9606
38 4KRV 1 A, B Beta-1,4-galactosyltransferase 1 Catalytic Domain, UNP residues 130-402 9913
39 1NWG 2 B, D beta-1,4-galactosyltransferase residues 57-329 9913
40 1NHE 2 B, D BETA-1,4-GALACTOSYLTRANSFERASE CHAINS A AND B FORM FIRST, C AND D SECOND LACTOSE SYNTHASE COMPLEX CATALYTIC DOMAIN, RESIDUES 130-402 9913
41 1FGX 1 A, B BETA 1,4 GALACTOSYLTRANSFERASE CATALYTIC DOMAIN 9913
42 4L41 2 C Beta-1,4-galactosyltransferase 1 UNP residues 126-398 9606
43 1FR8 1 A, B BETA 1,4 GALACTOSYLTRANSFERASE CATALYTIC DOMAIN 9913