Sequence Similarity Clusters for the Entities in PDB 1NF3

Entity #1 | Chains: A,B
G25K GTP-binding protein, placental isoform protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41338
95 % 6 37 899
90 % 6 37 932
70 % 22 78 319
50 % 50 137 187
40 % 51 138 202
30 % 412 772 16
Entity #2 | Chains: C,D
PAR-6B protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44816
95 % 1 1 33640
90 % 1 1 32169
70 % 1 3 17651
50 % 1 3 15346
40 % 1 3 13674
30 % 1 3 11695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.