Sequence Similarity Clusters for the Entities in PDB 1NF3

Entity #1 | Chains: A,B
G25K GTP-binding protein, placental isoform protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39745
95 % 6 37 870
90 % 6 37 902
70 % 21 77 304
50 % 48 131 190
40 % 49 132 205
30 % 396 743 17
Entity #2 | Chains: C,D
PAR-6B protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43135
95 % 1 1 32370
90 % 1 1 30992
70 % 1 3 16975
50 % 1 3 14807
40 % 1 3 13201
30 % 1 3 11308

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.