Sequence Similarity Clusters for the Entities in PDB 1NEZ

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, TLA(C) alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59117
95 % 1 1 42044
90 % 1 1 40119
70 % 379 736 6
50 % 385 750 6
40 % 403 792 10
30 % 432 923 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 136 98
95 % 69 234 63
90 % 69 234 66
70 % 452 940 4
50 % 460 962 3
40 % 460 962 7
30 % 460 962 12
Entity #3 | Chains: G,H
T-cell surface glycoprotein CD8 alpha chain protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5615
95 % 1 5 6269
90 % 1 5 6270
70 % 1 5 6104
50 % 1 5 5721
40 % 4 12 2312
30 % 4 12 2207

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures