Sequence Similarity Clusters for the Entities in PDB 1NEZ

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, TLA(C) alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57401
95 % 1 1 40875
90 % 1 1 39044
70 % 369 717 6
50 % 370 722 6
40 % 393 773 10
30 % 422 897 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 135 96
95 % 69 228 60
90 % 69 228 65
70 % 443 914 4
50 % 451 936 3
40 % 451 936 7
30 % 451 936 12
Entity #3 | Chains: G,H
T-cell surface glycoprotein CD8 alpha chain protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5411
95 % 1 5 6075
90 % 1 5 6071
70 % 1 5 5919
50 % 1 5 5557
40 % 4 12 2222
30 % 4 12 2123

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.