Sequence Similarity Clusters for the Entities in PDB 1NEZ

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, TLA(C) alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53647
95 % 1 1 38167
90 % 1 1 36548
70 % 343 649 7
50 % 344 654 7
40 % 364 701 11
30 % 388 817 14
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 131 92
95 % 63 212 65
90 % 63 212 69
70 % 414 847 5
50 % 420 867 5
40 % 420 867 9
30 % 420 867 13
Entity #3 | Chains: G,H
T-cell surface glycoprotein CD8 alpha chain protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 4937
95 % 1 5 5572
90 % 1 5 5573
70 % 1 5 5457
50 % 1 5 5151
40 % 4 12 2079
30 % 4 12 1991

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.