Sequence Similarity Clusters for the Entities in PDB 1NEZ

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, TLA(C) alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58350
95 % 1 1 41507
90 % 1 1 39623
70 % 374 727 6
50 % 375 732 6
40 % 398 783 10
30 % 427 909 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 135 97
95 % 69 230 63
90 % 69 230 66
70 % 446 924 4
50 % 454 946 3
40 % 454 946 7
30 % 454 946 12
Entity #3 | Chains: G,H
T-cell surface glycoprotein CD8 alpha chain protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5519
95 % 1 5 6178
90 % 1 5 6174
70 % 1 5 6017
50 % 1 5 5647
40 % 4 12 2284
30 % 4 12 2177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures