Sequence Similarity Clusters for the Entities in PDB 1NEZ

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, TLA(C) alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56028
95 % 1 1 39888
90 % 1 1 38137
70 % 359 687 6
50 % 360 692 6
40 % 382 742 10
30 % 406 859 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 133 94
95 % 64 215 64
90 % 64 215 68
70 % 429 878 4
50 % 437 900 3
40 % 437 900 8
30 % 437 900 14
Entity #3 | Chains: G,H
T-cell surface glycoprotein CD8 alpha chain protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5252
95 % 1 5 5910
90 % 1 5 5901
70 % 1 5 5772
50 % 1 5 5417
40 % 4 12 2175
30 % 4 12 2085

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.