Sequence Similarity Clusters for the Entities in PDB 1NEZ

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, TLA(C) alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56762
95 % 1 1 40414
90 % 1 1 38622
70 % 364 705 6
50 % 365 710 6
40 % 388 761 10
30 % 414 881 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 133 95
95 % 68 223 62
90 % 68 223 66
70 % 436 898 4
50 % 444 920 3
40 % 444 920 8
30 % 444 920 12
Entity #3 | Chains: G,H
T-cell surface glycoprotein CD8 alpha chain protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5327
95 % 1 5 5992
90 % 1 5 5985
70 % 1 5 5847
50 % 1 5 5493
40 % 4 12 2196
30 % 4 12 2099

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.