Sequence Similarity Clusters for the Entities in PDB 1NEX

Entity #1 | Chains: A,C
Centromere DNA-binding protein complex CBF3 subunit D protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 12584
95 % 3 3 12048
90 % 3 3 11855
70 % 3 3 11166
50 % 20 34 723
40 % 20 34 758
30 % 20 34 750
Entity #2 | Chains: B,D
CDC4 protein protein, length: 464 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10761
95 % 3 3 10641
90 % 3 3 10504
70 % 3 3 9962
50 % 3 3 9044
40 % 3 3 8267
30 % 5 6 5287
Entity #3 | Chains: E,F
GLL(TPO)PPQSG protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.