Sequence Similarity Clusters for the Entities in PDB 1NEP

Entity #1 | Chains: A
Epididymal secretory protein E1 protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22071
95 % 1 2 19784 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 1 2 19237
70 % 1 3 12200
50 % 1 3 10867
40 % 1 3 9789
30 % 1 5 5958

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures