1NEJ

Crystalline Human Carbonmonoxy Hemoglobin S (Liganded Sickle Cell Hemoglobin) Exhibits The R2 Quaternary State At Neutral pH In The Presence Of Polyethylene Glycol: The 2.1 Angstrom Resolution Crystal Structure


Sequence Similarity Clusters for the Entities in PDB 1NEJ

Entity #1 | Chains: A,C
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 184 258 12
95 % 193 269 17 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.8
PDBFlex
90 % 193 269 19
70 % 224 337 18
50 % 527 765 4
40 % 532 770 7
30 % 1010 1323 6
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 2721
95 % 190 254 25 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 193 259 20
70 % 241 352 16
50 % 528 765 4
40 % 533 770 7
30 % 1011 1323 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E83 2 B, D Hemoglobin subunit beta 9606
2 5E6E 2 B Hemoglobin subunit beta 9606
3 2HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY), BETA CHAIN 9606
4 3W4U 2 B, D, F Hemoglobin subunit beta 9606
5 5U3I 2 B, D Hemoglobin subunit beta 9606
6 6HBW 2 B, D PROTEIN (HEMOGLOBIN BETA) 9606
7 5UFJ 2 B, D Hemoglobin subunit beta 9606
8 1NEJ 2 B, D Hemoglobin beta chain beta chain 9606
9 1HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY) (BETA CHAIN) 9606