1NEJ

Crystalline Human Carbonmonoxy Hemoglobin S (Liganded Sickle Cell Hemoglobin) Exhibits The R2 Quaternary State At Neutral pH In The Presence Of Polyethylene Glycol: The 2.1 Angstrom Resolution Crystal Structure


Sequence Similarity Clusters for the Entities in PDB 1NEJ

Entity #1 | Chains: A,C
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 180 254 11
95 % 189 265 16 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 189 265 18
70 % 219 332 16
50 % 517 755 3
40 % 522 760 6
30 % 988 1299 6
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 2602
95 % 187 251 18 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 190 256 20
70 % 236 347 13
50 % 518 755 3
40 % 523 760 6
30 % 989 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E83 2 B, D Hemoglobin subunit beta 9606
2 5E6E 2 B Hemoglobin subunit beta 9606
3 2HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY), BETA CHAIN 9606
4 3W4U 2 B, D, F Hemoglobin subunit beta 9606
5 5U3I 2 B, D Hemoglobin subunit beta 9606
6 6HBW 2 B, D PROTEIN (HEMOGLOBIN BETA) 9606
7 5UFJ 2 B, D Hemoglobin subunit beta 9606
8 1NEJ 2 B, D Hemoglobin beta chain beta chain 9606
9 1HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY) (BETA CHAIN) 9606