1NEJ

Crystalline Human Carbonmonoxy Hemoglobin S (Liganded Sickle Cell Hemoglobin) Exhibits The R2 Quaternary State At Neutral pH In The Presence Of Polyethylene Glycol: The 2.1 Angstrom Resolution Crystal Structure


Sequence Similarity Clusters for the Entities in PDB 1NEJ

Entity #1 | Chains: A,C
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 182 256 12
95 % 191 267 17 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.8
PDBFlex
90 % 191 267 19
70 % 221 334 17
50 % 521 759 4
40 % 526 764 7
30 % 1002 1315 6
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 2652
95 % 189 253 20 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 192 258 20
70 % 238 349 14
50 % 522 759 4
40 % 527 764 7
30 % 1003 1315 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E83 2 B, D Hemoglobin subunit beta 9606
2 5E6E 2 B Hemoglobin subunit beta 9606
3 2HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY), BETA CHAIN 9606
4 3W4U 2 B, D, F Hemoglobin subunit beta 9606
5 5U3I 2 B, D Hemoglobin subunit beta 9606
6 6HBW 2 B, D PROTEIN (HEMOGLOBIN BETA) 9606
7 5UFJ 2 B, D Hemoglobin subunit beta 9606
8 1NEJ 2 B, D Hemoglobin beta chain beta chain 9606
9 1HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY) (BETA CHAIN) 9606