Sequence Similarity Clusters for the Entities in PDB 1NED

Entity #1 | Chains: A,B,C
HSLV protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 803
95 % 9 10 832
90 % 9 10 865
70 % 15 16 406
50 % 21 23 290
40 % 21 23 308
30 % 21 23 319

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.