Sequence Similarity Clusters for the Entities in PDB 1NEC

Entity #1 | Chains: A,B,C,D
PROTEIN (NITROREDUCTASE) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2355
95 % 5 6 2744 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 5 6 2812
70 % 9 21 729
50 % 9 22 702
40 % 9 22 735
30 % 10 25 663

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1KQB 1 A, B, C, D OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE 550
2 5J8D 1 A, B, C, D Oxygen-insensitive NAD(P)H nitroreductase 550 1 | Details
3 1KQC 1 A, B, C, D OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE 550
4 5J8G 1 A, B, C, D Oxygen-insensitive NAD(P)H nitroreductase 550 1 | Details
5 1NEC 1 A, B, C, D PROTEIN (NITROREDUCTASE) 550 1 | Details
6 1KQD 1 A, B, C, D OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE 550