Sequence Similarity Clusters for the Entities in PDB 1NE8

Entity #1 | Chains: A
conserved hypothetical protein YDCE protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67982
95 % 2 3 10773 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 3 4 7953
70 % 3 4 7698
50 % 4 10 2140
40 % 4 10 2130
30 % 6 14 1488

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.