Sequence Similarity Clusters for the Entities in PDB 1NE8

Entity #1 | Chains: A
conserved hypothetical protein YDCE protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70074
95 % 2 3 11167 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 3 4 8228
70 % 3 4 7953
50 % 4 10 2242
40 % 4 10 2227
30 % 6 14 1539

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures