Sequence Similarity Clusters for the Entities in PDB 1NDR

Entity #1 | Chains: A,B,C
NITRITE REDUCTASE protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12100
95 % 1 2 11816 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 11652
70 % 113 115 158
50 % 121 123 181
40 % 121 123 197
30 % 144 146 178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures