Sequence Similarity Clusters for the Entities in PDB 1NDR

Entity #1 | Chains: A,B,C
NITRITE REDUCTASE protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12578
95 % 1 2 12041 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 11867
70 % 130 132 157
50 % 138 140 186
40 % 138 140 197
30 % 161 163 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures