Sequence Similarity Clusters for the Entities in PDB 1NDP

Entity #1 | Chains: A,B
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 1283
95 % 13 25 748 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 13 25 780
70 % 13 25 822
50 % 58 125 65
40 % 71 153 32
30 % 71 154 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.