Sequence Similarity Clusters for the Entities in PDB 1NDO

Entity #1 | Chains: A,C,E
NAPHTHALENE 1,2-DIOXYGENASE protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 24 1526
95 % 27 27 1808
90 % 27 27 1853
70 % 30 31 1475
50 % 30 31 1520
40 % 41 50 376
30 % 42 52 351
Entity #2 | Chains: B,D,F
NAPHTHALENE 1,2-DIOXYGENASE protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 27 1342
95 % 27 27 1828
90 % 27 27 1875
70 % 30 31 1497
50 % 30 31 1544
40 % 30 31 1570
30 % 30 31 1535

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.