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Crystal structure of Fab fragment of antibody HyHEL-26 complexed with lysozyme
Sequence Clustering and Redundancy Reduction Results
1NDM
Sequence Clusters for the Sequence Entities in PDB 1NDM
Entity #1: Chains: A - antibody kappa light chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 12 3263
95% 12 22 1700
90% 14 26 1300
70% 403 1386 3
50% 982 3291 1
40% 983 3292 1
30% 1086 3880 1
Entity #2: Chains: B - immunoglobulin gamma 1 chain protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48860
95% 5 11 4542
90% 6 12 3958
70% 476 1588 2
50% 983 3291 1
40% 984 3292 1
30% 1087 3880 1
Entity #3: Chains: C - Lysozyme C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 424 522 3
95% 471 571 4
90% 482 588 5
70% 685 803 6
50% 690 812 6
40% 711 846 10
30% 711 846 16
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.