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Crystal structure of Fab fragment of antibody HyHEL-26 complexed with lysozyme
Sequence Clustering and Redundancy Reduction Results
1NDM
Sequence Clusters for the Sequence Entities in PDB 1NDM
Entity #1: Chains: A - antibody kappa light chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 12 2989
95% 12 22 1519
90% 13 24 1313
70% 381 1291 3
50% 933 3070 1
40% 934 3071 1
30% 1029 3629 1
Entity #2: Chains: B - immunoglobulin gamma 1 chain protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 45932
95% 5 11 4185
90% 6 12 3666
70% 452 1480 2
50% 934 3070 1
40% 935 3071 1
30% 1030 3629 1
Entity #3: Chains: C - Lysozyme C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 369 460 3
95% 416 509 5
90% 427 526 5
70% 630 741 6
50% 634 750 6
40% 655 784 9
30% 655 784 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.