Sequence Similarity Clusters for the Entities in PDB 1NDL

Entity #1 | Chains: A,B,C
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13359
95 % 3 3 7846 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 3 7800
70 % 10 18 695
50 % 63 125 65
40 % 76 153 32
30 % 76 154 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.