Sequence Similarity Clusters for the Entities in PDB 1NDL

Entity #1 | Chains: A,B,C
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13148
95 % 3 3 7727 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 3 7684
70 % 10 18 687
50 % 62 124 64
40 % 75 152 32
30 % 75 153 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.