Sequence Similarity Clusters for the Entities in PDB 1NDK

Entity #1 | Chains: A
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64679
95 % 14 25 765 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 14 25 799
70 % 14 25 836
50 % 61 127 59
40 % 74 155 33
30 % 74 156 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures