Sequence Similarity Clusters for the Entities in PDB 1NDJ

Entity #1 | Chains: A,B,C,D
Streptavidin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9621
95 % 119 144 69 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 122 147 71
70 % 122 147 83
50 % 123 148 112
40 % 123 148 136
30 % 151 202 92

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.