Sequence Similarity Clusters for the Entities in PDB 1NDI

Entity #1 | Chains: A,B
Carnitine Acetyltransferase protein, length: 596 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 5815
95 % 9 9 3771 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 11 11 3341
70 % 11 11 3301
50 % 11 11 3230
40 % 16 17 2273
30 % 27 29 1212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.