Sequence Similarity Clusters for the Entities in PDB 1NDG

Entity #1 | Chains: A
antibody kappa light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 4087
95 % 8 25 1799
90 % 10 33 1251
70 % 329 1803 2
50 % 808 4435 1
40 % 808 4435 1
30 % 880 5225 1
Entity #2 | Chains: B
immunoglobulin gamma 1 chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58499
95 % 1 1 40832
90 % 3 12 4872
70 % 394 2145 1
50 % 809 4435 1
40 % 809 4435 1
30 % 881 5225 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63980
95 % 495 686 4
90 % 504 703 5
70 % 689 919 6
50 % 693 927 6
40 % 705 961 11
30 % 705 961 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.