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Crystal structure of Fab fragment of antibody HyHEL-8 complexed with its antigen lysozyme
Sequence Clustering and Redundancy Reduction Results
1NDG
Sequence Clusters for the Sequence Entities in PDB 1NDG
Entity #1: Chains: A - antibody kappa light chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 12 2989
95% 6 22 1519
90% 6 24 1313
70% 220 1291 3
50% 537 3070 1
40% 537 3071 1
30% 581 3629 1
Entity #2: Chains: B - immunoglobulin gamma 1 chain protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 45931
95% 1 1 32311
90% 3 12 3666
70% 264 1480 2
50% 538 3070 1
40% 538 3071 1
30% 582 3629 1
Entity #3: Chains: C - Lysozyme C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 50629
95% 360 509 5
90% 369 526 5
70% 554 741 6
50% 558 750 6
40% 570 784 9
30% 570 784 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.