Sequence Similarity Clusters for the Entities in PDB 1NDF

Entity #1 | Chains: A,B
Carnitine Acetyltransferase protein, length: 596 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 5959
95 % 5 9 3857 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 11 3429
70 % 7 11 3395
50 % 7 11 3310
40 % 8 17 2319
30 % 12 29 1230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.