Sequence Similarity Clusters for the Entities in PDB 1NDE

Entity #1 | Chains: A
Estrogen receptor beta protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 28 771
95 % 30 32 807 Flexibility: Low
Max RMSD: 5.8, Avg RMSD: 1.8
PDBFlex
90 % 34 36 775
70 % 34 36 825
50 % 302 306 44
40 % 323 328 51
30 % 1214 1253 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures