Sequence Similarity Clusters for the Entities in PDB 1NDC

Entity #1 | Chains: A
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 13 1313
95 % 7 25 784 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 7 25 818
70 % 7 25 860
50 % 37 129 69
40 % 47 158 37
30 % 47 158 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures