Sequence Similarity Clusters for the Entities in PDB 1NDA

Entity #1 | Chains: A,B,C,D
TRYPANOTHIONE OXIDOREDUCTASE protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17142
95 % 5 5 6230 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 5 5 6221
70 % 22 28 684
50 % 22 28 737
40 % 24 30 723
30 % 114 127 160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.