Sequence Similarity Clusters for the Entities in PDB 1ND0

Entity #1 | Chains: A,C,E,G
IMMUNOGLOBULIN IGG2A protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 5348
95 % 41 49 697
90 % 41 50 699
70 % 1076 1766 2
50 % 2646 4347 1
40 % 2646 4347 1
30 % 3050 5126 1
Entity #2 | Chains: B,D,F,H
IMMUNOGLOBULIN IGG2A protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 5346
95 % 8 8 5969
90 % 16 20 1987
70 % 1278 2101 1
50 % 2647 4347 1
40 % 2647 4347 1
30 % 3051 5126 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.