Sequence Similarity Clusters for the Entities in PDB 1NCN

Entity #1 | Chains: A,B
T lymphocyte activation antigen CD86 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24254
95 % 1 2 20711 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 2 20125
70 % 1 2 18489
50 % 1 2 16044
40 % 1 2 14285
30 % 1 2 12216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures