Sequence Similarity Clusters for the Entities in PDB 1NCN

Entity #1 | Chains: A,B
T lymphocyte activation antigen CD86 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23734
95 % 1 2 20313 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 2 19754
70 % 1 2 18136
50 % 1 2 15756
40 % 1 2 14042
30 % 1 2 12012

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.