Sequence Similarity Clusters for the Entities in PDB 1NCI

Entity #1 | Chains: A,B
N-CADHERIN protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15638
95 % 1 3 14565 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 3 14288
70 % 1 3 13366
50 % 11 14 3399
40 % 14 18 2618
30 % 15 21 1951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures