Sequence Similarity Clusters for the Entities in PDB 1NCH

Entity #1 | Chains: A,B
N-CADHERIN protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15618
95 % 3 3 14546 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 3 14266
70 % 3 3 13347
50 % 13 14 3399
40 % 16 18 2618
30 % 17 21 1952

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures