Sequence Similarity Clusters for the Entities in PDB 1NCF

Entity #1 | Chains: A,B
TUMOR NECROSIS FACTOR RECEPTOR protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13915
95 % 2 3 13258 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.3
PDBFlex
90 % 2 3 13039
70 % 2 3 12262
50 % 2 3 10927
40 % 2 3 9899
30 % 3 8 4348

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures