Sequence Similarity Clusters for the Entities in PDB 1NCF

Entity #1 | Chains: A,B
TUMOR NECROSIS FACTOR RECEPTOR protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13093
95 % 2 3 12516 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.7
PDBFlex
90 % 2 3 12311
70 % 2 3 11569
50 % 2 3 10321
40 % 2 3 9363
30 % 3 8 4124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.