Sequence Similarity Clusters for the Entities in PDB 1NCB

Entity #1 | Chains: N
INFLUENZA A SUBTYPE N9 NEURAMINIDASE protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32045
95 % 32 44 1018
90 % 43 55 844
70 % 51 63 501
50 % 99 143 174
40 % 99 143 189
30 % 113 166 144
Entity #2 | Chains: L
IGG2A-KAPPA NC41 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 20118
95 % 1 4 17512
90 % 24 66 414
70 % 687 1775 2
50 % 1715 4367 1
40 % 1715 4367 1
30 % 1929 5151 1
Entity #3 | Chains: H
IGG2A-KAPPA NC41 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38143
95 % 1 4 17342
90 % 3 12 4500
70 % 829 2111 1
50 % 1716 4367 1
40 % 1716 4367 1
30 % 1930 5151 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.