Sequence Similarity Clusters for the Entities in PDB 1NC4

Entity #1 | Chains: A,C
MONOCLONAL ANTIBODY 2D12.5, LAMBDA LIGHT CHAIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20911
95 % 13 39 443
90 % 15 45 385
70 % 858 2274 1
50 % 1756 4607 1
40 % 1756 4607 1
30 % 1981 5422 1
Entity #2 | Chains: B
MONOCLONAL ANTIBODY 2D12.5, IGG1 GAMMA HEAVY CHAIN protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39549
95 % 3 4 18051
90 % 7 11 4380
70 % 849 2232 2
50 % 1757 4607 1
40 % 1757 4607 1
30 % 1982 5422 1
Entity #3 | Chains: D
MONOCLONAL ANTIBODY 2D12.5, IGG1 GAMMA HEAVY CHAIN protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39550
95 % 4 4 18051
90 % 8 11 4380
70 % 850 2232 2
50 % 1758 4607 1
40 % 1758 4607 1
30 % 1983 5422 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.