Sequence Similarity Clusters for the Entities in PDB 1NC2

Entity #1 | Chains: A,C
MONOCLONAL ANTIBODY 2D12.5, LAMBDA LIGHT CHAIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20950
95 % 7 39 444
90 % 9 45 387
70 % 682 2280 1
50 % 1400 4619 1
40 % 1400 4619 1
30 % 1568 5440 1
Entity #2 | Chains: B
MONOCLONAL ANTIBODY 2D12.5, IGG1 GAMMA HEAVY CHAIN protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39617
95 % 1 4 18088
90 % 4 11 4388
70 % 675 2238 2
50 % 1401 4619 1
40 % 1401 4619 1
30 % 1569 5440 1
Entity #3 | Chains: D
MONOCLONAL ANTIBODY 2D12.5, IGG1 GAMMA HEAVY CHAIN protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39618
95 % 2 4 18088
90 % 5 11 4388
70 % 676 2238 2
50 % 1402 4619 1
40 % 1402 4619 1
30 % 1570 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.