Sequence Similarity Clusters for the Entities in PDB 1NBY

Entity #1 | Chains: A
antibody kappa light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 4080
95 % 5 25 1798
90 % 6 32 1300
70 % 252 1790 2
50 % 625 4403 1
40 % 625 4403 1
30 % 677 5191 1
Entity #2 | Chains: B
immunoglobulin gamma 1 chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 12338
95 % 2 11 5506
90 % 2 12 4863
70 % 305 2129 1
50 % 626 4403 1
40 % 626 4403 1
30 % 678 5191 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63864
95 % 451 685 4
90 % 460 702 5
70 % 635 918 6
50 % 638 926 6
40 % 648 960 11
30 % 648 960 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.