Sequence Similarity Clusters for the Entities in PDB 1NBY

Entity #1 | Chains: A
antibody kappa light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 3672
95 % 5 22 1896
90 % 6 26 1432
70 % 222 1583 3
50 % 546 3846 1
40 % 546 3847 1
30 % 592 4574 1
Entity #2 | Chains: B
immunoglobulin gamma 1 chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 11162
95 % 2 11 5014
90 % 2 12 4413
70 % 267 1866 1
50 % 547 3846 1
40 % 547 3847 1
30 % 593 4574 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58832
95 % 402 627 4
90 % 411 644 5
70 % 586 859 6
50 % 589 868 6
40 % 599 902 10
30 % 599 902 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.