Sequence Similarity Clusters for the Entities in PDB 1NBX

Entity #1 | Chains: A,B,C,D
Streptavidin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9769
95 % 96 144 73 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 99 147 73
70 % 99 147 91
50 % 99 148 116
40 % 99 148 140
30 % 120 202 99

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures