Sequence Similarity Clusters for the Entities in PDB 1NBW

Entity #1 | Chains: A,C
GLYCEROL DEHYDRATASE REACTIVASE ALPHA SUBUNIT protein, length: 607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31836
95 % 1 1 26113 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 25225
70 % 1 1 22911
50 % 2 3 9562
40 % 2 3 8751
30 % 2 3 7704
Entity #2 | Chains: B,D
GLYCEROL DEHYDRATASE REACTIVASE BETA SUBUNIT protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47026
95 % 1 1 35164 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 33578
70 % 1 1 29855
50 % 1 1 25470
40 % 1 1 22421
30 % 1 1 18975

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures