Sequence Similarity Clusters for the Entities in PDB 1NBW

Entity #1 | Chains: A,C
GLYCEROL DEHYDRATASE REACTIVASE ALPHA SUBUNIT protein, length: 607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35570
95 % 1 1 30377 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 29139
70 % 1 1 26178
50 % 2 3 10346
40 % 2 3 9346
30 % 2 3 8021
Entity #2 | Chains: B,D
GLYCEROL DEHYDRATASE REACTIVASE BETA SUBUNIT protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35569
95 % 1 1 30376 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 29138
70 % 1 1 26177
50 % 1 1 22446
40 % 1 1 19773
30 % 1 1 16527

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures