Sequence Similarity Clusters for the Entities in PDB 1NBW

Entity #1 | Chains: A,C
GLYCEROL DEHYDRATASE REACTIVASE ALPHA SUBUNIT protein, length: 607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30406
95 % 1 1 24966 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 24149
70 % 1 1 22064
50 % 2 3 9160
40 % 2 3 8391
30 % 2 3 7385
Entity #2 | Chains: B,D
GLYCEROL DEHYDRATASE REACTIVASE BETA SUBUNIT protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45098
95 % 1 1 33777 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 32306
70 % 1 1 28833
50 % 1 1 24658
40 % 1 1 21711
30 % 1 1 18384

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.