Sequence Similarity Clusters for the Entities in PDB 1NBW

Entity #1 | Chains: A,C
GLYCEROL DEHYDRATASE REACTIVASE ALPHA SUBUNIT protein, length: 607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32268
95 % 1 1 26458 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 25553
70 % 1 1 23193
50 % 2 3 9708
40 % 2 3 8883
30 % 2 3 7815
Entity #2 | Chains: B,D
GLYCEROL DEHYDRATASE REACTIVASE BETA SUBUNIT protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47644
95 % 1 1 35607 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 33988
70 % 1 1 30206
50 % 1 1 25750
40 % 1 1 22672
30 % 1 1 19194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures