Sequence Similarity Clusters for the Entities in PDB 1NBW

Entity #1 | Chains: A,C
GLYCEROL DEHYDRATASE REACTIVASE ALPHA SUBUNIT protein, length: 607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31313
95 % 1 1 25723 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 24859
70 % 1 1 22591
50 % 2 3 9411
40 % 2 3 8618
30 % 2 3 7589
Entity #2 | Chains: B,D
GLYCEROL DEHYDRATASE REACTIVASE BETA SUBUNIT protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46281
95 % 1 1 34656 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 33113
70 % 1 1 29460
50 % 1 1 25146
40 % 1 1 22138
30 % 1 1 18748

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.