Sequence Similarity Clusters for the Entities in PDB 1NBV

Entity #1 | Chains: L
IGG2B-KAPPA BV04-01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38221
95 % 62 142 151
90 % 65 149 151
70 % 592 1773 2
50 % 1486 4363 1
40 % 1486 4363 1
30 % 1660 5147 1
Entity #2 | Chains: H
IGG2B-KAPPA BV04-01 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38220
95 % 1 2 29260
90 % 5 8 7272
70 % 717 2109 1
50 % 1487 4363 1
40 % 1487 4363 1
30 % 1661 5147 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.