Sequence Similarity Clusters for the Entities in PDB 1NBV

Entity #1 | Chains: L
IGG2B-KAPPA BV04-01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39766
95 % 65 145 147
90 % 71 155 149
70 % 755 2280 1
50 % 1549 4619 1
40 % 1549 4619 1
30 % 1736 5440 1
Entity #2 | Chains: H
IGG2B-KAPPA BV04-01 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39765
95 % 1 2 30437
90 % 5 8 7628
70 % 748 2238 2
50 % 1550 4619 1
40 % 1550 4619 1
30 % 1737 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.