Sequence Similarity Clusters for the Entities in PDB 1NBU

Entity #1 | Chains: A,E,F,G,H
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15734
95 % 1 3 9693 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 3 9586
70 % 1 3 9146
50 % 1 3 8267
40 % 1 3 7579
30 % 3 19 1620
Entity #2 | Chains: B,D
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45669
95 % 2 3 9693 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 3 9586
70 % 2 3 9146
50 % 2 3 8267
40 % 2 3 7579
30 % 4 19 1620
Entity #3 | Chains: C
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67251
95 % 3 3 9693 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 3 9586
70 % 3 3 9146
50 % 3 3 8267
40 % 3 3 7579
30 % 5 19 1620

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.