Sequence Similarity Clusters for the Entities in PDB 1NBU

Entity #1 | Chains: A,E,F,G,H
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16510
95 % 1 3 10118 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 3 9994
70 % 1 3 9504
50 % 1 3 8597
40 % 1 3 7879
30 % 3 19 1700
Entity #2 | Chains: B,D
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47540
95 % 2 3 10118 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 3 9994
70 % 2 3 9504
50 % 2 3 8597
40 % 2 3 7879
30 % 4 19 1700
Entity #3 | Chains: C
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69887
95 % 3 3 10118 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 3 9994
70 % 3 3 9504
50 % 3 3 8597
40 % 3 3 7879
30 % 5 19 1700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures