Sequence Similarity Clusters for the Entities in PDB 1NBU

Entity #1 | Chains: A,E,F,G,H
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11396
95 % 1 3 9430 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 3 9321
70 % 1 3 8916
50 % 1 3 8137
40 % 1 3 7437
30 % 3 19 1695
Entity #2 | Chains: B,D
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11396
95 % 2 3 9430 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 3 9321
70 % 2 3 8916
50 % 2 3 8137
40 % 2 3 7437
30 % 4 19 1695
Entity #3 | Chains: C
Probable dihydroneopterin aldolase protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54807
95 % 3 3 9430 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 3 9321
70 % 3 3 8916
50 % 3 3 8137
40 % 3 3 7437
30 % 5 19 1695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures