Sequence Similarity Clusters for the Entities in PDB 1NBO

Entity #1 | Chains: A,B,O
glyceraldehyde-3-phosphate dehydrogenase A protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 2115
95 % 4 8 1766 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 4 8 1801
70 % 5 12 891
50 % 100 139 69
40 % 100 139 88
30 % 100 139 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.