Sequence Similarity Clusters for the Entities in PDB 1NBO

Entity #1 | Chains: A,B,O
glyceraldehyde-3-phosphate dehydrogenase A protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 2166
95 % 4 8 1791 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 4 8 1827
70 % 5 12 904
50 % 100 139 72
40 % 100 139 92
30 % 100 139 103

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures