Sequence Similarity Clusters for the Entities in PDB 1NBM

Entity #1 | Chains: A,B,C
F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 29 271
95 % 15 41 261
90 % 15 41 270
70 % 19 59 162
50 % 22 71 159
40 % 22 71 175
30 % 22 71 191
Entity #2 | Chains: D,F
F1-ATPASE protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 40 193
95 % 15 42 262
90 % 15 42 271
70 % 22 72 132
50 % 22 72 160
40 % 22 72 176
30 % 22 72 192
Entity #3 | Chains: E
F1-ATPASE protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 40 193
95 % 16 42 262
90 % 16 42 271
70 % 23 72 132
50 % 23 72 160
40 % 23 72 176
30 % 23 72 192
Entity #4 | Chains: G
F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 39 832
95 % 14 39 1135
90 % 14 39 1162
70 % 15 41 1139
50 % 15 41 1195
40 % 20 65 598
30 % 20 65 593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.