Sequence Similarity Clusters for the Entities in PDB 1NBM

Entity #1 | Chains: A,B,C
F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 29 246
95 % 15 41 242
90 % 15 41 252
70 % 19 56 153
50 % 20 63 166
40 % 20 63 183
30 % 20 63 195
Entity #2 | Chains: D,F
F1-ATPASE protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 40 179
95 % 15 42 243
90 % 15 42 253
70 % 20 64 138
50 % 20 64 167
40 % 20 64 184
30 % 20 64 196
Entity #3 | Chains: E
F1-ATPASE protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 40 179
95 % 16 42 243
90 % 16 42 253
70 % 21 64 138
50 % 21 64 167
40 % 21 64 184
30 % 21 64 196
Entity #4 | Chains: G
F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 39 765
95 % 14 39 1053
90 % 14 39 1075
70 % 15 41 1064
50 % 15 41 1112
40 % 18 57 624
30 % 18 57 635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.