Sequence Similarity Clusters for the Entities in PDB 1NBE

Entity #1 | Chains: A,C
ASPARTATE TRANSCARBAMOYLASE protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 2551
95 % 38 63 275 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.6
PDBFlex
90 % 38 64 284
70 % 39 66 315
50 % 41 70 300
40 % 46 78 254
30 % 90 143 142
Entity #2 | Chains: B,D
ASPARTATE TRANSCARBAMOYLASE protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45400
95 % 34 59 307 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.8
PDBFlex
90 % 34 59 319
70 % 34 60 364
50 % 34 61 421
40 % 34 61 442
30 % 35 62 435

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures