Sequence Similarity Clusters for the Entities in PDB 1NBE

Entity #1 | Chains: A,C
ASPARTATE TRANSCARBAMOYLASE protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 2448
95 % 38 63 266 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.6
PDBFlex
90 % 38 64 274
70 % 39 66 295
50 % 41 70 281
40 % 46 78 252
30 % 88 141 138
Entity #2 | Chains: B,D
ASPARTATE TRANSCARBAMOYLASE protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43859
95 % 34 59 294 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.8
PDBFlex
90 % 34 59 304
70 % 34 60 345
50 % 34 61 391
40 % 34 61 412
30 % 35 62 413

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.