Sequence Similarity Clusters for the Entities in PDB 1NBE

Entity #1 | Chains: A,C
ASPARTATE TRANSCARBAMOYLASE protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 2357
95 % 39 64 246 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 39 65 258
70 % 40 67 277
50 % 42 71 268
40 % 47 79 241
30 % 89 142 135
Entity #2 | Chains: B,D
ASPARTATE TRANSCARBAMOYLASE protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42586
95 % 34 59 280 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.9
PDBFlex
90 % 34 59 289
70 % 34 60 324
50 % 34 61 368
40 % 34 61 397
30 % 35 62 391

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.